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PROFEAT: a web server for computing structural and physicochemical features of proteins and peptides from amino acid sequence

Li, Z. R., H. H. Lin, L. Y. Han, L. Jiang, X. Chen and Y. Z. Chen (2006)."PROFEAT: a web server for computing structural and physicochemical features of proteins and peptides from amino acid sequence."Nucleic Acids Research 34: W32-W37.Lin, M. Z., B. Hu, L. J. Chen, P. Sun, Y. Fan, P. Wu and X. Chen (2009). "Computational Identification of Potential Molecular Interactions in Arabidopsis." Plant Physiology 151(1): 34-46.


Database of traditional Chinese medicine and its application to studies of mechanism and to prescription validation

Chen, X., H. Zhou, Y. B. Liu, J. F. Wang, H. Li, C. Y. Ung, L. Y. Han, Z. W. Cao and Y. Z. Chen (2006). "Database of traditional Chinese medicine and its application to studies of mechanism and to prescription validation."British Journal of Pharmacology 149(8): 1092-1103.

Cytokinin represses phosphate-starvation response through increasing of intracellular phosphate level

Wang, X. M., K. K. Yi, Y. Tao, F. Wang, Z. C. Wu, D. Jiang, X. Chen, L. H. Zhu and P. Wu (2006)."Cytokinin represses phosphate-starvation response through increasing of intracellular phosphate level."Plant Cell and Environment 29(10): 1924-1935.

Prediction of functional class of the SARS coronavirus proteins by a statistical learning method

Cai, C. Z., L. Y. Han, X. Chen, Z. W. Cao and Y. Z. Chen (2005). "Prediction of functional class of the SARS coronavirus proteins by a statistical learning method."Journal of Proteome Research 4(5): 1855-1862.

Computer prediction of drug resistance mutations in proteins

Cao, Z. W., L. Y. Han, C. J. Zheng, Z. L. Ji, X. Chen, H. H. Lin and Y. Z. Chen (2005)."Computer prediction of drug resistance mutations in proteins."Drug Discovery Today 10(7): 521-529.

The Biomolecular Interaction Network Database and related tools 2005 update

Alfarano, C., C. E. Andrade, K. Anthony, N. Bahroos, M. Bajec, K. Bantoft, D. Betel, B. Bobechko, K. Boutilier, E. Burgess, K. Buzadzija, R. Cavero, C. D'Abreo, I. Donaldson, D. Dorairajoo, M. J. Dumontier, M. R. Dumontier, V. Earles, R. Farrall, H. Feldman, E. Garderman, Y. Gong, R. Gonzaga, V. Grytsan, E. Gryz, V. Gu, E. Haldorsen, A. Halupa, R. Haw, A. Hrvojic, L. Hurrell, R. Isserlin, F. Jack, F. Juma, A. Khan, T. Kon, S. Konopinsky, V. Le, E. Lee, S. Ling, M. Magidin, J. Moniakis, J. Montojo, S. Moore, B. Muskat, I. Ng, J. P. Paraiso, B. Parker, G. Pintilie, R. Pirone, J. J. Salama, S. Sgro, T. Shan, Y. Shu, J. Siew, D. Skinner, K. Snyder, R. Stasiuk, D. Strumpf, B. Tuekam, S. Tao, Z. Wang, M. White, R. Willis, C. Wolting, S. Wong, A. Wrong, C. Xin, R. Yao, B. Yates, S. Zhang, K. Zheng, T. Pawson, B. F. F. Ouellette and C. W. V. Hogue (2005). "The Biomolecular Interaction Network Database and related tools 2005 update."Nucleic Acids Research 33: D418-D424.

Drug ADME-associated protein database as a resource for facilitating pharmacogenomics research

Zheng, C. J., L. Z. Sun, L. Y. Han, Z. L. Ji, X. Chen and Y. Z. Chen (2004)."Drug ADME-associated protein database as a resource for facilitating pharmacogenomics research."Drug Development Research 62(2): 134-142.

Effect of molecular descriptor feature selection in support vector machine classification of pharmacokinetic and toxicological properties of chemical agents

Xue, Y., Z. R. Li, C. W. Yap, L. Z. Sun, X. Chen and Y. Z. Chen (2004). "Effect of molecular descriptor feature selection in support vector machine classification of pharmacokinetic and toxicological properties of chemical agents."Journal of Chemical Information and Computer Sciences 44(5): 1630-1638.